PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009803269.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 344aa    MW: 36915.2 Da    PI: 5.4482
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009803269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_180.81.5e-25246308163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+++v++L++eN++Lk+el++l++e++kl+se+
  XP_009803269.1 246 ERELKRQKRKQSNRESARRSRLRKQAECEELQRRVEALSGENHSLKDELQRLSEECEKLTSEN 308
                     89***********************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.0E-28192IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1707.6E-21240305No hitNo description
SMARTSM003388.9E-24246310IPR004827Basic-leucine zipper domain
PfamPF001702.1E-24246308IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.507248311IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.77E-12249305No hitNo description
CDDcd147028.22E-24251301No hitNo description
PROSITE patternPS000360253268IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0010629Biological Processnegative regulation of gene expression
GO:0090342Biological Processregulation of cell aging
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MGAGEESTPT KPSKPASTQE TQTTPSYPDW SSSMQAYYSA GATPPFFASP VASPASHPYL  60
WGGQHPLMPP YGAPVPYPAL YPPAGVYAHP NMATANLESN RKDPEGKDRS TNKKLKASSG  120
GKAGDSGKVA SGSGNDGATQ SDETRSEGTS DTNDENDNHE FAASKKGSFD QMLADGASAQ  180
NNPTTANYQT SMHANPVTVP ATNLNIGMDA WNASSAGPGA IIIQPNANGP VIGHEGRMND  240
QWVQDERELK RQKRKQSNRE SARRSRLRKQ AECEELQRRV EALSGENHSL KDELQRLSEE  300
CEKLTSENSS IKEELTRLCG PDAVSKLESN GNASHLQSNV EEAN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1262268RRSRLRK
2262269RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00039PBMTransfer from AT4G36730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7302460.0KJ730246.1 Nicotiana tabacum G-box-binding factor 1-like protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009803269.10.0PREDICTED: G-box-binding factor 1-like isoform X2
SwissprotP427741e-109GBF1_ARATH; G-box-binding factor 1
TrEMBLA0A075EYP40.0A0A075EYP4_TOBAC; G-box-binding factor 1-like protein
STRINGPGSC0003DMT4000329600.0(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.23e-74G-box binding factor 1